Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX347737: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1M spots, 506.8M bases, 308.5Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Foodborne Pathogen Survey

PRJNA218682 • SRP029813 • All experiments • All runs

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Genome Sequencing Project

Sample:

SAMN02352702 • SRS478527 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025

Library:

Name: Salmonella enterica str. CFSAN004025_01 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.17.28

Runs: 1 run, 1M spots, 506.8M bases, 308.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR975409	1,044,233	506.8M	308.5Mb	2013-09-10

ID:: 494089

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